Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs61831892 chr10:1534907 C/T 0.000185 117 38.33 42.9 25.83 KM Plot
THYM rs61831907 chr10:1534994 G/T 0.000185 117 38.33 42.9 25.83 KM Plot
THYM rs61831908 chr10:1536390 A/G 0.000205 116 38.33 44.58 25.83 KM Plot
THYM rs61831910 chr10:1536557 G/C 0.000205 116 38.33 44.58 25.83 KM Plot
THYM rs61831911 chr10:1536588 T/C 0.000205 116 38.33 44.58 25.83 KM Plot
THYM rs61831912 chr10:1536687 C/A 0.000205 116 38.33 44.58 25.83 KM Plot
THYM rs61831913 chr10:1538998 A/C 0.000185 117 38.33 42.9 25.83 KM Plot
THYM rs61831914 chr10:1539253 C/T 0.000185 117 38.33 42.9 25.83 KM Plot
THYM rs61831915 chr10:1540177 G/A 0.000185 117 38.33 42.9 25.83 KM Plot
THYM rs61831916 chr10:1542834 C/T 0.000185 117 38.33 42.9 25.83 KM Plot
THYM rs61831917 chr10:1543852 G/T 0.00015 119 38.33 45.87 25.83 KM Plot
THYM rs61831919 chr10:1549243 T/G 0.000176 117 38.33 45.87 25.83 KM Plot
THYM rs61926115 chr12:67037457 A/T 0 116 41.77 43.8 4.13 KM Plot
THYM rs62016709 chr14:40227208 G/A 4.0E-6 119 41.22 42.73 23.63 KM Plot
THYM rs62016723 chr14:40234195 T/G 4.0E-6 119 41.22 42.73 23.63 KM Plot